Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917352.1_cds_XP_016466969.1_59768
CDS Infomation

[gene=LOC107789628] [db_xref=GeneID:107789628] [protein=ultraviolet-B receptor UVR8-like isoform X2] [protein_id=XP_016466969.1] [location=complement(join(42130..42166,42437..42628,42717..43148,44452..44623,44839..44911,45398..45445,53577..53770,57456..57711))] [gbkey=CDS]
Sequence

ATGGATATTGATGAAATATTTGGGGAGTCCCGGCGGCCCGTGAGTCTACCAAACAAGAGT
GCAATTTACGTTTGGGGTTACAACCATTCTAGGCAAACGGGTGGGAAGGACAAAGAGAGG
AGTTTGAGGATACCAAAGCAGCTTCCTCCGGAGATATTTGGATGCCCAGCTGATGGGAAT
TCTTGTTGGTTGGATATTGCTTGTGGTCGTGAACACACTGCTGTTGTCGCCTCTGATGGA
TCGCTCTTTACCTGGGGGGCTAACGAATTTGGTCAGCTGGGCGATGGAACTGAAAGCGCT
AGGAAGCACAACAAGAAAGTGAAGCAATTGCAATCTGATTTTGTTATTAGTGTTTCATGT
GGAGCACATTGTACTGATGCCATTGCAGAACCACGTGAAAATGATGATACAGTGTCTGCT
CGGAGACTTTGGGTCTGGGGACAGAACCAGGGATCCAACTATCCACGACTCTTTTGGGGT
GCCTTTGCTCCTTCTACGGTTATCCGCCAAGTTTCTTGTGGTGCTGTTCATGTTGTGGCT
TTATCAGAAGAAGGCTTACTGCAAGCTTGGGGCTATAATGAATATGGTCAGCTTGGGAGA
GGTGTTACATCTGAAGGCCTTCAAGGCCCTCGTGTAATTAATGGATATGCTAAATTTCTC
GATGAAGCCCCTGAACTTGTGAAGATTACCCAAGTGTCATGCGGGGAATACCATACTGCA
GCTATATCAGAGAAAGGCGATGTCTATACATGGGGACTGGGAAGCATGGGACAACTTGGG
CATTGTTCCCTTCAGTCAGGTGACAAGGAACTTTTACCTAGGCGTGTAGTTGCCCTTGAT
GGCATAATTATAAAAGATGTTGCCTGTGGTGGTGTTCATAGCTGTGCCGTGACTGCAAAA
GGGGCTCTTTATGCTTGGGGCGGTGGTCAGGCTGGACAATTGGGAGTTGGTCCCCTAAAT
GGATTCTTTTCATGCAAACTCAATGAATCTGAGATGATGCTCCGGAATATACCAGTTTTG
GTTGTTCCTGATGGTGTGCAACTTGTTGCTTGTGGGCATTCACACACACTTATTTCTGCT
AAAGATGGACGAATACATGGATGGGGTTACAATTGCTACGGTCAAGCGGCTAATGAGAAG
TCGACATATGCCTGGTATCCGTCACCAGTTGATTGGTGTGTTGGGGAGGTCCGCAAAATG
GCTGCTGGTGGTGGACATTCAGCAGTGTTGACAGATGCATGTTCGCTGAAGGAGTTGTGC
GAGTTTCAGCTTGCAGAAACTGTGAATGTATCCAATGCTTTGGAGGTTGAAGATATTGCC
TCGAGAACAGGAGCTGATGCTTTAGCACGACTTTGTGAAAGATTGAGGGAGCATTACTAC
AATGATGACGAGTATGGTACGTGA

Peptide Sequence

PEP ID

XP_016466969.1
PEP Infomation

PREDICTED: ultraviolet-B receptor UVR8-like isoform X2 [Nicotiana tabacum]
Sequence

MDIDEIFGESRRPVSLPNKSAIYVWGYNHSRQTGGKDKERSLRIPKQLPPEIFGCPADGN
SCWLDIACGREHTAVVASDGSLFTWGANEFGQLGDGTESARKHNKKVKQLQSDFVISVSC
GAHCTDAIAEPRENDDTVSARRLWVWGQNQGSNYPRLFWGAFAPSTVIRQVSCGAVHVVA
LSEEGLLQAWGYNEYGQLGRGVTSEGLQGPRVINGYAKFLDEAPELVKITQVSCGEYHTA
AISEKGDVYTWGLGSMGQLGHCSLQSGDKELLPRRVVALDGIIIKDVACGGVHSCAVTAK
GALYAWGGGQAGQLGVGPLNGFFSCKLNESEMMLRNIPVLVVPDGVQLVACGHSHTLISA
KDGRIHGWGYNCYGQAANEKSTYAWYPSPVDWCVGEVRKMAAGGGHSAVLTDACSLKELC
EFQLAETVNVSNALEVEDIASRTGADALARLCERLREHYYNDDEYGT

Transcript Sequence

Gene sequence data has not been registered.